Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Fhad1os1-201ENSMUST00000146094 997 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC6.24□□□□□ -1.41
Hmgb3O54879 Gm23021-201ENSMUST00000158765 169 ntBASIC6.24□□□□□ -1.41
Hmgb3O54879 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC6.24□□□□□ -1.41
Hmgb3O54879 Gm15664-201ENSMUST00000160167 184 ntBASIC6.24□□□□□ -1.41
Hmgb3O54879 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC6.24□□□□□ -1.41
Hmgb3O54879 Gm4462-201ENSMUST00000166453 492 ntBASIC6.24□□□□□ -1.41
Hmgb3O54879 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC6.24□□□□□ -1.41
Hmgb3O54879 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC6.24□□□□□ -1.41
Hmgb3O54879 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC6.24□□□□□ -1.41
Hmgb3O54879 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Hmgb3O54879 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 Gm38254-201ENSMUST00000192276 1009 ntBASIC6.24□□□□□ -1.41
Hmgb3O54879 Gm6072-201ENSMUST00000203989 496 ntBASIC6.24□□□□□ -1.41
Hmgb3O54879 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.24□□□□□ -1.41
Hmgb3O54879 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC6.24□□□□□ -1.41
Hmgb3O54879 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 AC134913.1-201ENSMUST00000224563 504 ntBASIC6.24□□□□□ -1.41
Hmgb3O54879 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC6.24□□□□□ -1.41
Hmgb3O54879 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.24□□□□□ -1.41
Hmgb3O54879 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Hmgb3O54879 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Hmgb3O54879 AC159195.2-201ENSMUST00000223670 3757 ntBASIC6.24□□□□□ -1.41
Hmgb3O54879 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Hmgb3O54879 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Hmgb3O54879 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.24□□□□□ -1.41
Hmgb3O54879 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb3O54879 Gm37783-201ENSMUST00000192025 1856 ntBASIC6.24□□□□□ -1.41
Hmgb3O54879 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm37964-201ENSMUST00000192459 4905 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC6.23□□□□□ -1.41
Hmgb3O54879 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb3O54879 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb3O54879 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb3O54879 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb3O54879 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb3O54879 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm38302-201ENSMUST00000191676 2076 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm12481-201ENSMUST00000102482 297 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm23368-201ENSMUST00000116939 96 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC6.23□□□□□ -1.41
Hmgb3O54879 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm16305-201ENSMUST00000140747 556 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm3571-201ENSMUST00000170703 1060 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm6633-201ENSMUST00000173851 270 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Mir7060-201ENSMUST00000183486 137 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm18301-201ENSMUST00000185261 888 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm28530-201ENSMUST00000190473 577 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm37012-201ENSMUST00000194991 1078 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm45401-201ENSMUST00000209456 733 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Olfr46-202ENSMUST00000211771 1190 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb3O54879 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC6.23□□□□□ -1.41
Hmgb3O54879 AC154028.1-201ENSMUST00000217071 379 ntTSL 5 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm2649-201ENSMUST00000218825 610 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 AC167202.2-201ENSMUST00000220155 296 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Lilrb4a-215ENSMUST00000220182 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb3O54879 Fkbp3-202ENSMUST00000220730 579 ntTSL 5 BASIC6.23□□□□□ -1.41
Hmgb3O54879 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC6.23□□□□□ -1.41
Hmgb3O54879 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Hmgb3O54879 AC134577.2-201ENSMUST00000228541 715 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb3O54879 Olfr46-201ENSMUST00000072655 957 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb3O54879 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb3O54879 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb3O54879 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb3O54879 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb3O54879 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.23□□□□□ -1.41
Hmgb3O54879 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm37426-201ENSMUST00000195241 2470 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms