Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdfS4R2K0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdfS4R2K0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PdfS4R2K0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.23□□□□□ -0.13
PdfS4R2K0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PdfS4R2K0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PdfS4R2K0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PdfS4R2K0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PdfS4R2K0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.23□□□□□ -0.13
PdfS4R2K0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdfS4R2K0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdfS4R2K0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdfS4R2K0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdfS4R2K0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdfS4R2K0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdfS4R2K0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdfS4R2K0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdfS4R2K0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdfS4R2K0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdfS4R2K0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdfS4R2K0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.22□□□□□ -0.13
PdfS4R2K0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.22□□□□□ -0.13
PdfS4R2K0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdfS4R2K0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdfS4R2K0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdfS4R2K0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdfS4R2K0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdfS4R2K0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdfS4R2K0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdfS4R2K0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdfS4R2K0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
PdfS4R2K0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdfS4R2K0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdfS4R2K0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.21□□□□□ -0.13
PdfS4R2K0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdfS4R2K0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdfS4R2K0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdfS4R2K0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdfS4R2K0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdfS4R2K0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdfS4R2K0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PdfS4R2K0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdfS4R2K0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.21□□□□□ -0.13
PdfS4R2K0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PdfS4R2K0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdfS4R2K0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdfS4R2K0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdfS4R2K0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PdfS4R2K0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
PdfS4R2K0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdfS4R2K0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PdfS4R2K0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
PdfS4R2K0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.21□□□□□ -0.14
PdfS4R2K0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.2□□□□□ -0.14
PdfS4R2K0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PdfS4R2K0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.2□□□□□ -0.14
PdfS4R2K0 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.2□□□□□ -0.14
PdfS4R2K0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdfS4R2K0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdfS4R2K0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdfS4R2K0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PdfS4R2K0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdfS4R2K0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdfS4R2K0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdfS4R2K0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdfS4R2K0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PdfS4R2K0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdfS4R2K0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PdfS4R2K0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdfS4R2K0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PdfS4R2K0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdfS4R2K0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
PdfS4R2K0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PdfS4R2K0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdfS4R2K0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PdfS4R2K0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PdfS4R2K0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PdfS4R2K0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PdfS4R2K0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms