Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp6v1c1Q9Z1G3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp6v1c1Q9Z1G3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp6v1c1Q9Z1G3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp6v1c1Q9Z1G3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atp6v1c1Q9Z1G3 Gm12922-201ENSMUST00000120626 809 ntBASIC18.19■□□□□ 0.5
Atp6v1c1Q9Z1G3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp6v1c1Q9Z1G3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
Atp6v1c1Q9Z1G3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Atp6v1c1Q9Z1G3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Atp6v1c1Q9Z1G3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atp6v1c1Q9Z1G3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp6v1c1Q9Z1G3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Golgb1-201ENSMUST00000023534 498 ntBASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atp6v1c1Q9Z1G3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp6v1c1Q9Z1G3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp6v1c1Q9Z1G3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1c1Q9Z1G3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Atp6v1c1Q9Z1G3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1c1Q9Z1G3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1c1Q9Z1G3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1c1Q9Z1G3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1c1Q9Z1G3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1c1Q9Z1G3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1c1Q9Z1G3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.14■□□□□ 0.49
Atp6v1c1Q9Z1G3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1c1Q9Z1G3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Atp6v1c1Q9Z1G3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1c1Q9Z1G3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms