Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcb1Q9Z0H3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smarcb1Q9Z0H3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcb1Q9Z0H3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcb1Q9Z0H3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcb1Q9Z0H3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcb1Q9Z0H3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcb1Q9Z0H3 Gm2399-201ENSMUST00000104944 225 ntBASIC19.31■□□□□ 0.68
Smarcb1Q9Z0H3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.31■□□□□ 0.68
Smarcb1Q9Z0H3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.31■□□□□ 0.68
Smarcb1Q9Z0H3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcb1Q9Z0H3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcb1Q9Z0H3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcb1Q9Z0H3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcb1Q9Z0H3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smarcb1Q9Z0H3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcb1Q9Z0H3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Smarcb1Q9Z0H3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcb1Q9Z0H3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcb1Q9Z0H3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcb1Q9Z0H3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcb1Q9Z0H3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcb1Q9Z0H3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcb1Q9Z0H3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcb1Q9Z0H3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcb1Q9Z0H3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcb1Q9Z0H3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcb1Q9Z0H3 Gm5643-201ENSMUST00000117081 966 ntBASIC19.29■□□□□ 0.68
Smarcb1Q9Z0H3 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.29■□□□□ 0.68
Smarcb1Q9Z0H3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcb1Q9Z0H3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcb1Q9Z0H3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Gm18666-201ENSMUST00000190039 958 ntBASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Flg-201ENSMUST00000050758 1488 ntBASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcb1Q9Z0H3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Gm10812-201ENSMUST00000099864 546 ntBASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcb1Q9Z0H3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcb1Q9Z0H3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcb1Q9Z0H3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Smarcb1Q9Z0H3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
Smarcb1Q9Z0H3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcb1Q9Z0H3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcb1Q9Z0H3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.26■□□□□ 0.67
Smarcb1Q9Z0H3 Gm11249-201ENSMUST00000117071 859 ntBASIC19.26■□□□□ 0.67
Smarcb1Q9Z0H3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.26■□□□□ 0.67
Smarcb1Q9Z0H3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcb1Q9Z0H3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcb1Q9Z0H3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcb1Q9Z0H3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcb1Q9Z0H3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcb1Q9Z0H3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcb1Q9Z0H3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcb1Q9Z0H3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcb1Q9Z0H3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smarcb1Q9Z0H3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcb1Q9Z0H3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcb1Q9Z0H3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms