Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd2Q9R1A8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd2Q9R1A8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.13■□□□□ 0.65
Rfwd2Q9R1A8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.13■□□□□ 0.65
Rfwd2Q9R1A8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd2Q9R1A8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd2Q9R1A8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd2Q9R1A8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rfwd2Q9R1A8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd2Q9R1A8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd2Q9R1A8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.12■□□□□ 0.65
Rfwd2Q9R1A8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfwd2Q9R1A8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rfwd2Q9R1A8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfwd2Q9R1A8 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.12■□□□□ 0.65
Rfwd2Q9R1A8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfwd2Q9R1A8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfwd2Q9R1A8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfwd2Q9R1A8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Gm27454-201ENSMUST00000185090 204 ntBASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rfwd2Q9R1A8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Gm12821-201ENSMUST00000120022 600 ntBASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Mir7075-201ENSMUST00000184187 82 ntBASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Serp2-204ENSMUST00000228055 705 ntBASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfwd2Q9R1A8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfwd2Q9R1A8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rfwd2Q9R1A8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.08■□□□□ 0.65
Rfwd2Q9R1A8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfwd2Q9R1A8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfwd2Q9R1A8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Rfwd2Q9R1A8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfwd2Q9R1A8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfwd2Q9R1A8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rfwd2Q9R1A8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.08■□□□□ 0.64
Rfwd2Q9R1A8 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.08■□□□□ 0.64
Rfwd2Q9R1A8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfwd2Q9R1A8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfwd2Q9R1A8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfwd2Q9R1A8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfwd2Q9R1A8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfwd2Q9R1A8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Rfwd2Q9R1A8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfwd2Q9R1A8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rfwd2Q9R1A8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfwd2Q9R1A8 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.07■□□□□ 0.64
Rfwd2Q9R1A8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rfwd2Q9R1A8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rfwd2Q9R1A8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfwd2Q9R1A8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms