Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Golph3-205ENSMUST00000228671 2842 ntBASIC16.83■□□□□ 0.28
Clcf1Q9QZM3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcf1Q9QZM3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Clcf1Q9QZM3 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcf1Q9QZM3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clcf1Q9QZM3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcf1Q9QZM3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcf1Q9QZM3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcf1Q9QZM3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcf1Q9QZM3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcf1Q9QZM3 Nespas-201ENSMUST00000143738 1083 ntBASIC16.81■□□□□ 0.28
Clcf1Q9QZM3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Clcf1Q9QZM3 Mir5133-201ENSMUST00000174955 77 ntBASIC16.81■□□□□ 0.28
Clcf1Q9QZM3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.81■□□□□ 0.28
Clcf1Q9QZM3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Clcf1Q9QZM3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcf1Q9QZM3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Clcf1Q9QZM3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcf1Q9QZM3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Gm7290-201ENSMUST00000104990 617 ntBASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Gm12918-201ENSMUST00000120234 636 ntBASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Gm15710-201ENSMUST00000121821 636 ntBASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Gm5075-201ENSMUST00000196916 622 ntBASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcf1Q9QZM3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcf1Q9QZM3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcf1Q9QZM3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcf1Q9QZM3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Clcf1Q9QZM3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcf1Q9QZM3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms