Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom3Q9QXN0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom3Q9QXN0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Shroom3Q9QXN0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom3Q9QXN0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom3Q9QXN0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 BC021767-201ENSMUST00000126387 1716 ntBASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shroom3Q9QXN0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Shroom3Q9QXN0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shroom3Q9QXN0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shroom3Q9QXN0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shroom3Q9QXN0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.69■□□□□ 0.58
Shroom3Q9QXN0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Shroom3Q9QXN0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.69■□□□□ 0.58
Shroom3Q9QXN0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Shroom3Q9QXN0 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.69■□□□□ 0.58
Shroom3Q9QXN0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shroom3Q9QXN0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shroom3Q9QXN0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shroom3Q9QXN0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shroom3Q9QXN0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Gm20760-201ENSMUST00000179197 648 ntBASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Gm7290-201ENSMUST00000104990 617 ntBASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Gm12918-201ENSMUST00000120234 636 ntBASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Gm15710-201ENSMUST00000121821 636 ntBASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Gm5075-201ENSMUST00000196916 622 ntBASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shroom3Q9QXN0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Gm5408-201ENSMUST00000197998 747 ntBASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Gm6365-201ENSMUST00000054711 744 ntBASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shroom3Q9QXN0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom3Q9QXN0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.66■□□□□ 0.58
Shroom3Q9QXN0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.66■□□□□ 0.58
Shroom3Q9QXN0 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.66■□□□□ 0.58
Shroom3Q9QXN0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom3Q9QXN0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom3Q9QXN0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom3Q9QXN0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom3Q9QXN0 Gm26524-201ENSMUST00000192339 390 ntBASIC18.66■□□□□ 0.58
Shroom3Q9QXN0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shroom3Q9QXN0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom3Q9QXN0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom3Q9QXN0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Shroom3Q9QXN0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.65■□□□□ 0.58
Shroom3Q9QXN0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.65■□□□□ 0.58
Shroom3Q9QXN0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom3Q9QXN0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom3Q9QXN0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shroom3Q9QXN0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms