Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Prg4Q9JM99 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.96■□□□□ 0.3
Prg4Q9JM99 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prg4Q9JM99 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prg4Q9JM99 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prg4Q9JM99 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prg4Q9JM99 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.95■□□□□ 0.3
Prg4Q9JM99 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.95■□□□□ 0.3
Prg4Q9JM99 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Prg4Q9JM99 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.95■□□□□ 0.3
Prg4Q9JM99 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prg4Q9JM99 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prg4Q9JM99 BC021767-201ENSMUST00000126387 1716 ntBASIC16.95■□□□□ 0.3
Prg4Q9JM99 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.95■□□□□ 0.3
Prg4Q9JM99 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prg4Q9JM99 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prg4Q9JM99 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Prg4Q9JM99 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prg4Q9JM99 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prg4Q9JM99 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prg4Q9JM99 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prg4Q9JM99 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prg4Q9JM99 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prg4Q9JM99 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prg4Q9JM99 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Prg4Q9JM99 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.94■□□□□ 0.3
Prg4Q9JM99 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.94■□□□□ 0.3
Prg4Q9JM99 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prg4Q9JM99 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prg4Q9JM99 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Gm12527-201ENSMUST00000117967 564 ntBASIC16.93■□□□□ 0.3
Prg4Q9JM99 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prg4Q9JM99 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prg4Q9JM99 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prg4Q9JM99 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prg4Q9JM99 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prg4Q9JM99 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prg4Q9JM99 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prg4Q9JM99 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prg4Q9JM99 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.92■□□□□ 0.3
Prg4Q9JM99 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.92■□□□□ 0.3
Prg4Q9JM99 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prg4Q9JM99 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prg4Q9JM99 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.92■□□□□ 0.3
Prg4Q9JM99 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Prg4Q9JM99 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prg4Q9JM99 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prg4Q9JM99 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prg4Q9JM99 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prg4Q9JM99 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.91■□□□□ 0.3
Prg4Q9JM99 Gm20760-201ENSMUST00000179197 648 ntBASIC16.91■□□□□ 0.3
Prg4Q9JM99 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prg4Q9JM99 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prg4Q9JM99 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prg4Q9JM99 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prg4Q9JM99 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.91■□□□□ 0.3
Prg4Q9JM99 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Prg4Q9JM99 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Prg4Q9JM99 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prg4Q9JM99 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.91■□□□□ 0.3
Prg4Q9JM99 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.9■□□□□ 0.3
Prg4Q9JM99 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Gm2559-201ENSMUST00000201323 363 ntBASIC16.9■□□□□ 0.3
Prg4Q9JM99 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.9■□□□□ 0.3
Prg4Q9JM99 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prg4Q9JM99 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Prg4Q9JM99 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Prg4Q9JM99 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms