Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.35■□□□□ 0.53
Tdp2Q9JJX7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tdp2Q9JJX7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tdp2Q9JJX7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tdp2Q9JJX7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tdp2Q9JJX7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tdp2Q9JJX7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tdp2Q9JJX7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tdp2Q9JJX7 Smad6-203ENSMUST00000179458 273 ntBASIC18.34■□□□□ 0.53
Tdp2Q9JJX7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.34■□□□□ 0.53
Tdp2Q9JJX7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tdp2Q9JJX7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tdp2Q9JJX7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.34■□□□□ 0.53
Tdp2Q9JJX7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tdp2Q9JJX7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tdp2Q9JJX7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tdp2Q9JJX7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tdp2Q9JJX7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tdp2Q9JJX7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tdp2Q9JJX7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tdp2Q9JJX7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tdp2Q9JJX7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tdp2Q9JJX7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tdp2Q9JJX7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Tdp2Q9JJX7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 Gm26833-201ENSMUST00000180899 440 ntBASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tdp2Q9JJX7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tdp2Q9JJX7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tdp2Q9JJX7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tdp2Q9JJX7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tdp2Q9JJX7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tdp2Q9JJX7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.31■□□□□ 0.52
Tdp2Q9JJX7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.31■□□□□ 0.52
Tdp2Q9JJX7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tdp2Q9JJX7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tdp2Q9JJX7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tdp2Q9JJX7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tdp2Q9JJX7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tdp2Q9JJX7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tdp2Q9JJX7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tdp2Q9JJX7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.3■□□□□ 0.52
Tdp2Q9JJX7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tdp2Q9JJX7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tdp2Q9JJX7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tdp2Q9JJX7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tdp2Q9JJX7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tdp2Q9JJX7 Gm11421-201ENSMUST00000122124 294 ntBASIC18.3■□□□□ 0.52
Tdp2Q9JJX7 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.3■□□□□ 0.52
Tdp2Q9JJX7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tdp2Q9JJX7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tdp2Q9JJX7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.3■□□□□ 0.52
Tdp2Q9JJX7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tdp2Q9JJX7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tdp2Q9JJX7 Gm27801-201ENSMUST00000184174 223 ntBASIC18.29■□□□□ 0.52
Tdp2Q9JJX7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.29■□□□□ 0.52
Tdp2Q9JJX7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Tdp2Q9JJX7 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.29■□□□□ 0.52
Tdp2Q9JJX7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tdp2Q9JJX7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tdp2Q9JJX7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Tdp2Q9JJX7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tdp2Q9JJX7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tdp2Q9JJX7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tdp2Q9JJX7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tdp2Q9JJX7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
Tdp2Q9JJX7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tdp2Q9JJX7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tdp2Q9JJX7 Gm43060-201ENSMUST00000200621 289 ntBASIC18.28■□□□□ 0.52
Tdp2Q9JJX7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.28■□□□□ 0.52
Tdp2Q9JJX7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tdp2Q9JJX7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms