Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.82■□□□□ 0.12
Rbfox1Q9JJ43 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Gm21956-201ENSMUST00000179946 522 ntBASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rbfox1Q9JJ43 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rbfox1Q9JJ43 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rbfox1Q9JJ43 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rbfox1Q9JJ43 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rbfox1Q9JJ43 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rbfox1Q9JJ43 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rbfox1Q9JJ43 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rbfox1Q9JJ43 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rbfox1Q9JJ43 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rbfox1Q9JJ43 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms