Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Nkx2-4Q9EQM3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-4Q9EQM3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Nkx2-4Q9EQM3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.2■□□□□ 0.66
Nkx2-4Q9EQM3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-4Q9EQM3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.2■□□□□ 0.66
Nkx2-4Q9EQM3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-4Q9EQM3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.2■□□□□ 0.66
Nkx2-4Q9EQM3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-4Q9EQM3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nkx2-4Q9EQM3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-4Q9EQM3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-4Q9EQM3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.19■□□□□ 0.66
Nkx2-4Q9EQM3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-4Q9EQM3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-4Q9EQM3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-4Q9EQM3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Nkx2-4Q9EQM3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-4Q9EQM3 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.18■□□□□ 0.66
Nkx2-4Q9EQM3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-4Q9EQM3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-4Q9EQM3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nkx2-4Q9EQM3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.18■□□□□ 0.66
Nkx2-4Q9EQM3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-4Q9EQM3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-4Q9EQM3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-4Q9EQM3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nkx2-4Q9EQM3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.17■□□□□ 0.66
Nkx2-4Q9EQM3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-4Q9EQM3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Nkx2-4Q9EQM3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nkx2-4Q9EQM3 Odf3b-204ENSMUST00000227834 930 ntBASIC19.17■□□□□ 0.66
Nkx2-4Q9EQM3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-4Q9EQM3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-4Q9EQM3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-4Q9EQM3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.16■□□□□ 0.66
Nkx2-4Q9EQM3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-4Q9EQM3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-4Q9EQM3 Gm23634-201ENSMUST00000175071 91 ntBASIC19.16■□□□□ 0.66
Nkx2-4Q9EQM3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nkx2-4Q9EQM3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-4Q9EQM3 Gm42545-201ENSMUST00000202755 922 ntBASIC19.16■□□□□ 0.66
Nkx2-4Q9EQM3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.16■□□□□ 0.66
Nkx2-4Q9EQM3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Gm18025-201ENSMUST00000221733 862 ntBASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Timm23-208ENSMUST00000226683 750 ntBASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-4Q9EQM3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.14■□□□□ 0.66
Nkx2-4Q9EQM3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-4Q9EQM3 Gm3375-201ENSMUST00000203929 796 ntBASIC19.14■□□□□ 0.65
Nkx2-4Q9EQM3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-4Q9EQM3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-4Q9EQM3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-4Q9EQM3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Nkx2-4Q9EQM3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx2-4Q9EQM3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-4Q9EQM3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.13■□□□□ 0.65
Nkx2-4Q9EQM3 Gm10138-203ENSMUST00000206952 366 ntBASIC19.13■□□□□ 0.65
Nkx2-4Q9EQM3 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.13■□□□□ 0.65
Nkx2-4Q9EQM3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-4Q9EQM3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-4Q9EQM3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-4Q9EQM3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-4Q9EQM3 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.13■□□□□ 0.65
Nkx2-4Q9EQM3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.13■□□□□ 0.65
Nkx2-4Q9EQM3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-4Q9EQM3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx2-4Q9EQM3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nkx2-4Q9EQM3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx2-4Q9EQM3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx2-4Q9EQM3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nkx2-4Q9EQM3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms