Protein–RNA interactions for Protein: Q9DB90

Smg9, Protein SMG9, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg9Q9DB90 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg9Q9DB90 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Smg9Q9DB90 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg9Q9DB90 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Smg9Q9DB90 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg9Q9DB90 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Smg9Q9DB90 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.25■□□□□ 0.67
Smg9Q9DB90 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg9Q9DB90 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smg9Q9DB90 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg9Q9DB90 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smg9Q9DB90 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smg9Q9DB90 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg9Q9DB90 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.24■□□□□ 0.67
Smg9Q9DB90 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smg9Q9DB90 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg9Q9DB90 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg9Q9DB90 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg9Q9DB90 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg9Q9DB90 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg9Q9DB90 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg9Q9DB90 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg9Q9DB90 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg9Q9DB90 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg9Q9DB90 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smg9Q9DB90 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smg9Q9DB90 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Smg9Q9DB90 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smg9Q9DB90 Gm10698-201ENSMUST00000182663 604 ntBASIC19.23■□□□□ 0.67
Smg9Q9DB90 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.23■□□□□ 0.67
Smg9Q9DB90 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.23■□□□□ 0.67
Smg9Q9DB90 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.23■□□□□ 0.67
Smg9Q9DB90 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Smg9Q9DB90 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Smg9Q9DB90 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg9Q9DB90 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg9Q9DB90 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg9Q9DB90 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg9Q9DB90 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg9Q9DB90 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg9Q9DB90 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg9Q9DB90 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smg9Q9DB90 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg9Q9DB90 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.22■□□□□ 0.67
Smg9Q9DB90 Gm6576-201ENSMUST00000169678 883 ntBASIC19.22■□□□□ 0.67
Smg9Q9DB90 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.22■□□□□ 0.67
Smg9Q9DB90 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.22■□□□□ 0.67
Smg9Q9DB90 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Smg9Q9DB90 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smg9Q9DB90 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg9Q9DB90 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.22■□□□□ 0.67
Smg9Q9DB90 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.22■□□□□ 0.67
Smg9Q9DB90 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg9Q9DB90 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smg9Q9DB90 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smg9Q9DB90 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg9Q9DB90 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.21■□□□□ 0.67
Smg9Q9DB90 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.21■□□□□ 0.67
Smg9Q9DB90 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg9Q9DB90 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg9Q9DB90 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg9Q9DB90 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg9Q9DB90 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smg9Q9DB90 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg9Q9DB90 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smg9Q9DB90 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Smg9Q9DB90 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg9Q9DB90 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg9Q9DB90 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg9Q9DB90 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg9Q9DB90 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smg9Q9DB90 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg9Q9DB90 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg9Q9DB90 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg9Q9DB90 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg9Q9DB90 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg9Q9DB90 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.19■□□□□ 0.66
Smg9Q9DB90 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smg9Q9DB90 Gm18666-201ENSMUST00000190039 958 ntBASIC19.19■□□□□ 0.66
Smg9Q9DB90 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smg9Q9DB90 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg9Q9DB90 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smg9Q9DB90 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Smg9Q9DB90 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms