Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Gm15565-201ENSMUST00000118890 427 ntBASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.21■□□□□ 0.51
Rrp8Q9DB85 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.21■□□□□ 0.51
Rrp8Q9DB85 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrp8Q9DB85 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rrp8Q9DB85 Flg-201ENSMUST00000050758 1488 ntBASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrp8Q9DB85 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.2■□□□□ 0.5
Rrp8Q9DB85 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rrp8Q9DB85 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rrp8Q9DB85 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Rrp8Q9DB85 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rrp8Q9DB85 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.19■□□□□ 0.5
Rrp8Q9DB85 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.19■□□□□ 0.5
Rrp8Q9DB85 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rrp8Q9DB85 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rrp8Q9DB85 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rrp8Q9DB85 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rrp8Q9DB85 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rrp8Q9DB85 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rrp8Q9DB85 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.19■□□□□ 0.5
Rrp8Q9DB85 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrp8Q9DB85 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrp8Q9DB85 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
Rrp8Q9DB85 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rrp8Q9DB85 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rrp8Q9DB85 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rrp8Q9DB85 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms