Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3404Q9D506 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3404Q9D506 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3404Q9D506 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3404Q9D506 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3404Q9D506 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Gm3404Q9D506 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3404Q9D506 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Gm3404Q9D506 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3404Q9D506 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.74■□□□□ 0.75
Gm3404Q9D506 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3404Q9D506 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.73■□□□□ 0.75
Gm3404Q9D506 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.73■□□□□ 0.75
Gm3404Q9D506 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Gm3404Q9D506 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3404Q9D506 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3404Q9D506 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3404Q9D506 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.72■□□□□ 0.75
Gm3404Q9D506 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.72■□□□□ 0.75
Gm3404Q9D506 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3404Q9D506 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3404Q9D506 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3404Q9D506 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3404Q9D506 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gm3404Q9D506 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3404Q9D506 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3404Q9D506 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3404Q9D506 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3404Q9D506 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3404Q9D506 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3404Q9D506 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3404Q9D506 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.71■□□□□ 0.75
Gm3404Q9D506 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3404Q9D506 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.71■□□□□ 0.75
Gm3404Q9D506 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3404Q9D506 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3404Q9D506 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3404Q9D506 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3404Q9D506 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.71■□□□□ 0.75
Gm3404Q9D506 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3404Q9D506 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3404Q9D506 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.7■□□□□ 0.74
Gm3404Q9D506 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.7■□□□□ 0.74
Gm3404Q9D506 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Gm3404Q9D506 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.7■□□□□ 0.74
Gm3404Q9D506 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3404Q9D506 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3404Q9D506 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gm3404Q9D506 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3404Q9D506 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3404Q9D506 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3404Q9D506 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3404Q9D506 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3404Q9D506 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3404Q9D506 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3404Q9D506 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3404Q9D506 Golph3-205ENSMUST00000228671 2842 ntBASIC19.69■□□□□ 0.74
Gm3404Q9D506 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3404Q9D506 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3404Q9D506 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms