Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim13Q9CYB0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim13Q9CYB0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trim13Q9CYB0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim13Q9CYB0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim13Q9CYB0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim13Q9CYB0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim13Q9CYB0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim13Q9CYB0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim13Q9CYB0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim13Q9CYB0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim13Q9CYB0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim13Q9CYB0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim13Q9CYB0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim13Q9CYB0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms