Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q9CR55 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Q9CR55 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.22■□□□□ 0.35
Q9CR55 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q9CR55 Gm9959-201ENSMUST00000068277 390 ntBASIC17.22■□□□□ 0.35
Q9CR55 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Q9CR55 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q9CR55 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q9CR55 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Q9CR55 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q9CR55 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q9CR55 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Q9CR55 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.21■□□□□ 0.35
Q9CR55 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Q9CR55 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Q9CR55 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q9CR55 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q9CR55 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.21■□□□□ 0.35
Q9CR55 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Q9CR55 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q9CR55 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q9CR55 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q9CR55 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q9CR55 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.21■□□□□ 0.35
Q9CR55 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.21■□□□□ 0.35
Q9CR55 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.21■□□□□ 0.35
Q9CR55 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q9CR55 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.21■□□□□ 0.35
Q9CR55 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q9CR55 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Q9CR55 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Q9CR55 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.21■□□□□ 0.35
Q9CR55 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.21■□□□□ 0.35
Q9CR55 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Q9CR55 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Q9CR55 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q9CR55 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q9CR55 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q9CR55 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.2■□□□□ 0.34
Q9CR55 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Q9CR55 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Q9CR55 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.2■□□□□ 0.34
Q9CR55 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q9CR55 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Q9CR55 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q9CR55 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Q9CR55 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q9CR55 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.2■□□□□ 0.34
Q9CR55 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Q9CR55 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Q9CR55 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Q9CR55 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Q9CR55 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q9CR55 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Q9CR55 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q9CR55 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q9CR55 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q9CR55 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q9CR55 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q9CR55 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q9CR55 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q9CR55 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q9CR55 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Q9CR55 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Q9CR55 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.18■□□□□ 0.34
Q9CR55 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Q9CR55 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Q9CR55 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Q9CR55 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Q9CR55 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Q9CR55 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.18■□□□□ 0.34
Q9CR55 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Q9CR55 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Q9CR55 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.17■□□□□ 0.34
Q9CR55 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Q9CR55 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Q9CR55 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.17■□□□□ 0.34
Q9CR55 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.17■□□□□ 0.34
Q9CR55 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.17■□□□□ 0.34
Q9CR55 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Q9CR55 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Q9CR55 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Q9CR55 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Q9CR55 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Q9CR55 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Q9CR55 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Q9CR55 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Q9CR55 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Q9CR55 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Q9CR55 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.16■□□□□ 0.34
Q9CR55 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Q9CR55 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Q9CR55 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Q9CR55 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Q9CR55 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Q9CR55 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Q9CR55 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Q9CR55 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.16■□□□□ 0.34
Q9CR55 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Q9CR55 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms