Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retreg3Q9CQV4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.72■□□□□ 0.59
Retreg3Q9CQV4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retreg3Q9CQV4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retreg3Q9CQV4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retreg3Q9CQV4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retreg3Q9CQV4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg3Q9CQV4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg3Q9CQV4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg3Q9CQV4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retreg3Q9CQV4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg3Q9CQV4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg3Q9CQV4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg3Q9CQV4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg3Q9CQV4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.67■□□□□ 0.58
Retreg3Q9CQV4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg3Q9CQV4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.67■□□□□ 0.58
Retreg3Q9CQV4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Retreg3Q9CQV4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg3Q9CQV4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg3Q9CQV4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg3Q9CQV4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg3Q9CQV4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg3Q9CQV4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg3Q9CQV4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.66■□□□□ 0.58
Retreg3Q9CQV4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.66■□□□□ 0.58
Retreg3Q9CQV4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg3Q9CQV4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Retreg3Q9CQV4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms