Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chchd1Q9CQA6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chchd1Q9CQA6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chchd1Q9CQA6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chchd1Q9CQA6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.08□□□□□ -0.15
Chchd1Q9CQA6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Chchd1Q9CQA6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chchd1Q9CQA6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Chchd1Q9CQA6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chchd1Q9CQA6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms