Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trim34aQ99PP6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Trim34aQ99PP6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim34aQ99PP6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trim34aQ99PP6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim34aQ99PP6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim34aQ99PP6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim34aQ99PP6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim34aQ99PP6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Trim34aQ99PP6 Gm11927-201ENSMUST00000118472 759 ntBASIC22.99■■□□□ 1.27
Trim34aQ99PP6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC22.99■■□□□ 1.27
Trim34aQ99PP6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.99■■□□□ 1.27
Trim34aQ99PP6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim34aQ99PP6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trim34aQ99PP6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim34aQ99PP6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim34aQ99PP6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim34aQ99PP6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Mir1199-201ENSMUST00000117015 119 ntBASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim34aQ99PP6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim34aQ99PP6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim34aQ99PP6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC22.97■■□□□ 1.27
Trim34aQ99PP6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Trim34aQ99PP6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim34aQ99PP6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trim34aQ99PP6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim34aQ99PP6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim34aQ99PP6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trim34aQ99PP6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim34aQ99PP6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC22.97■■□□□ 1.27
Trim34aQ99PP6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim34aQ99PP6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim34aQ99PP6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim34aQ99PP6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim34aQ99PP6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim34aQ99PP6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC22.96■■□□□ 1.27
Trim34aQ99PP6 Gm13836-201ENSMUST00000121159 501 ntBASIC22.96■■□□□ 1.27
Trim34aQ99PP6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.96■■□□□ 1.27
Trim34aQ99PP6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim34aQ99PP6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.96■■□□□ 1.27
Trim34aQ99PP6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim34aQ99PP6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim34aQ99PP6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim34aQ99PP6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC22.95■■□□□ 1.26
Trim34aQ99PP6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim34aQ99PP6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Trim34aQ99PP6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Trim34aQ99PP6 Gm7977-201ENSMUST00000193787 748 ntBASIC22.95■■□□□ 1.26
Trim34aQ99PP6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
Trim34aQ99PP6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC22.95■■□□□ 1.26
Trim34aQ99PP6 AC135963.1-201ENSMUST00000211640 717 ntBASIC22.95■■□□□ 1.26
Trim34aQ99PP6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim34aQ99PP6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Trim34aQ99PP6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim34aQ99PP6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim34aQ99PP6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trim34aQ99PP6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim34aQ99PP6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim34aQ99PP6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.94■■□□□ 1.26
Trim34aQ99PP6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC22.94■■□□□ 1.26
Trim34aQ99PP6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trim34aQ99PP6 Alkbh1-212ENSMUST00000185301 408 ntBASIC22.94■■□□□ 1.26
Trim34aQ99PP6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.94■■□□□ 1.26
Trim34aQ99PP6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim34aQ99PP6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Trim34aQ99PP6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim34aQ99PP6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trim34aQ99PP6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim34aQ99PP6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
Trim34aQ99PP6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Trim34aQ99PP6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim34aQ99PP6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC22.93■■□□□ 1.26
Trim34aQ99PP6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC22.93■■□□□ 1.26
Trim34aQ99PP6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Trim34aQ99PP6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim34aQ99PP6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim34aQ99PP6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.93■■□□□ 1.26
Trim34aQ99PP6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Trim34aQ99PP6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC22.93■■□□□ 1.26
Trim34aQ99PP6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim34aQ99PP6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim34aQ99PP6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms