Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim8Q99PJ2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Trim8Q99PJ2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim8Q99PJ2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim8Q99PJ2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.18■□□□□ 0.5
Trim8Q99PJ2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim8Q99PJ2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.18■□□□□ 0.5
Trim8Q99PJ2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim8Q99PJ2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim8Q99PJ2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim8Q99PJ2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim8Q99PJ2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim8Q99PJ2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim8Q99PJ2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim8Q99PJ2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim8Q99PJ2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim8Q99PJ2 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.16■□□□□ 0.5
Trim8Q99PJ2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim8Q99PJ2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim8Q99PJ2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim8Q99PJ2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim8Q99PJ2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.16■□□□□ 0.5
Trim8Q99PJ2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim8Q99PJ2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.16■□□□□ 0.5
Trim8Q99PJ2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.15■□□□□ 0.5
Trim8Q99PJ2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim8Q99PJ2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim8Q99PJ2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim8Q99PJ2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim8Q99PJ2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim8Q99PJ2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim8Q99PJ2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim8Q99PJ2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim8Q99PJ2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim8Q99PJ2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim8Q99PJ2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim8Q99PJ2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Trim8Q99PJ2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim8Q99PJ2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim8Q99PJ2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim8Q99PJ2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim8Q99PJ2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim8Q99PJ2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim8Q99PJ2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim8Q99PJ2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim8Q99PJ2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim8Q99PJ2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.12■□□□□ 0.49
Trim8Q99PJ2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.12■□□□□ 0.49
Trim8Q99PJ2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim8Q99PJ2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim8Q99PJ2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim8Q99PJ2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim8Q99PJ2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trim8Q99PJ2 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms