Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-1Q99MA9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Flg-201ENSMUST00000050758 1488 ntBASIC17.44■□□□□ 0.38
Nkx6-1Q99MA9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx6-1Q99MA9 Gm11927-201ENSMUST00000118472 759 ntBASIC17.43■□□□□ 0.38
Nkx6-1Q99MA9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx6-1Q99MA9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.43■□□□□ 0.38
Nkx6-1Q99MA9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Gm7367-201ENSMUST00000057611 492 ntBASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-1Q99MA9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Gm30025-201ENSMUST00000218555 728 ntBASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-1Q99MA9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-1Q99MA9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-1Q99MA9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nkx6-1Q99MA9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-1Q99MA9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.4■□□□□ 0.38
Nkx6-1Q99MA9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.4■□□□□ 0.38
Nkx6-1Q99MA9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-1Q99MA9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-1Q99MA9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-1Q99MA9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-1Q99MA9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.4■□□□□ 0.38
Nkx6-1Q99MA9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-1Q99MA9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-1Q99MA9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Nkx6-1Q99MA9 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.39■□□□□ 0.38
Nkx6-1Q99MA9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx6-1Q99MA9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.39■□□□□ 0.37
Nkx6-1Q99MA9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx6-1Q99MA9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx6-1Q99MA9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms