Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Grk6-206ENSMUST00000224995 2971 ntBASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdk5rap3Q99LM2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.27■□□□□ 0.67
Cdk5rap3Q99LM2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.27■□□□□ 0.67
Cdk5rap3Q99LM2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdk5rap3Q99LM2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdk5rap3Q99LM2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cdk5rap3Q99LM2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Gm6139-201ENSMUST00000079261 882 ntBASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap3Q99LM2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap3Q99LM2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Gm40848-201ENSMUST00000221998 324 ntBASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap3Q99LM2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Gm26833-201ENSMUST00000180899 440 ntBASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk5rap3Q99LM2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk5rap3Q99LM2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk5rap3Q99LM2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.21■□□□□ 0.67
Cdk5rap3Q99LM2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.21■□□□□ 0.67
Cdk5rap3Q99LM2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk5rap3Q99LM2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk5rap3Q99LM2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk5rap3Q99LM2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk5rap3Q99LM2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms