Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk9Q99J95 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk9Q99J95 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk9Q99J95 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk9Q99J95 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Cdk9Q99J95 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk9Q99J95 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk9Q99J95 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk9Q99J95 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.69■□□□□ 0.58
Cdk9Q99J95 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk9Q99J95 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk9Q99J95 Gm12922-201ENSMUST00000120626 809 ntBASIC18.69■□□□□ 0.58
Cdk9Q99J95 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.69■□□□□ 0.58
Cdk9Q99J95 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.69■□□□□ 0.58
Cdk9Q99J95 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk9Q99J95 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk9Q99J95 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cdk9Q99J95 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Gm13241-201ENSMUST00000094493 780 ntBASIC18.68■□□□□ 0.58
Cdk9Q99J95 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.68■□□□□ 0.58
Cdk9Q99J95 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk9Q99J95 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk9Q99J95 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk9Q99J95 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.67■□□□□ 0.58
Cdk9Q99J95 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.67■□□□□ 0.58
Cdk9Q99J95 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk9Q99J95 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk9Q99J95 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk9Q99J95 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cdk9Q99J95 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cdk9Q99J95 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cdk9Q99J95 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk9Q99J95 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk9Q99J95 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk9Q99J95 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk9Q99J95 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cdk9Q99J95 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk9Q99J95 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk9Q99J95 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk9Q99J95 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk9Q99J95 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk9Q99J95 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk9Q99J95 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk9Q99J95 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk9Q99J95 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Cdk9Q99J95 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk9Q99J95 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk9Q99J95 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk9Q99J95 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk9Q99J95 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk9Q99J95 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.65■□□□□ 0.58
Cdk9Q99J95 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.65■□□□□ 0.58
Cdk9Q99J95 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cdk9Q99J95 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk9Q99J95 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk9Q99J95 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk9Q99J95 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdk9Q99J95 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk9Q99J95 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk9Q99J95 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk9Q99J95 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk9Q99J95 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk9Q99J95 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.64■□□□□ 0.57
Cdk9Q99J95 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk9Q99J95 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cdk9Q99J95 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk9Q99J95 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Cdk9Q99J95 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk9Q99J95 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk9Q99J95 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk9Q99J95 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.63■□□□□ 0.57
Cdk9Q99J95 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk9Q99J95 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk9Q99J95 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
Cdk9Q99J95 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.63■□□□□ 0.57
Cdk9Q99J95 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.63■□□□□ 0.57
Cdk9Q99J95 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cdk9Q99J95 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk9Q99J95 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk9Q99J95 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk9Q99J95 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk9Q99J95 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk9Q99J95 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.62■□□□□ 0.57
Cdk9Q99J95 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms