Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Thumpd1Q99J36 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd1Q99J36 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd1Q99J36 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd1Q99J36 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd1Q99J36 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd1Q99J36 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd1Q99J36 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd1Q99J36 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd1Q99J36 Golgb1-201ENSMUST00000023534 498 ntBASIC16.59■□□□□ 0.25
Thumpd1Q99J36 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd1Q99J36 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd1Q99J36 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Thumpd1Q99J36 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd1Q99J36 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Thumpd1Q99J36 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Thumpd1Q99J36 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Thumpd1Q99J36 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.58■□□□□ 0.25
Thumpd1Q99J36 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Thumpd1Q99J36 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Thumpd1Q99J36 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Thumpd1Q99J36 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Thumpd1Q99J36 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Thumpd1Q99J36 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Thumpd1Q99J36 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Thumpd1Q99J36 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Thumpd1Q99J36 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Thumpd1Q99J36 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thumpd1Q99J36 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd1Q99J36 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd1Q99J36 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.56■□□□□ 0.24
Thumpd1Q99J36 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd1Q99J36 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd1Q99J36 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Thumpd1Q99J36 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd1Q99J36 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd1Q99J36 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd1Q99J36 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Thumpd1Q99J36 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thumpd1Q99J36 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd1Q99J36 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd1Q99J36 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Thumpd1Q99J36 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Thumpd1Q99J36 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd1Q99J36 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd1Q99J36 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Thumpd1Q99J36 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.55■□□□□ 0.24
Thumpd1Q99J36 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd1Q99J36 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
Thumpd1Q99J36 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thumpd1Q99J36 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd1Q99J36 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd1Q99J36 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd1Q99J36 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.54■□□□□ 0.24
Thumpd1Q99J36 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd1Q99J36 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Thumpd1Q99J36 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd1Q99J36 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.54■□□□□ 0.24
Thumpd1Q99J36 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd1Q99J36 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd1Q99J36 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thumpd1Q99J36 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Gm7860-201ENSMUST00000121190 879 ntBASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd1Q99J36 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Thumpd1Q99J36 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thumpd1Q99J36 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.52■□□□□ 0.24
Thumpd1Q99J36 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.52■□□□□ 0.24
Thumpd1Q99J36 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thumpd1Q99J36 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thumpd1Q99J36 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thumpd1Q99J36 Gm12922-201ENSMUST00000120626 809 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms