Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Gm10653-202ENSMUST00000139570 835 ntBASIC18.33■□□□□ 0.52
Prdm9Q96EQ9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Prdm9Q96EQ9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prdm9Q96EQ9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prdm9Q96EQ9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prdm9Q96EQ9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Prdm9Q96EQ9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prdm9Q96EQ9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prdm9Q96EQ9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prdm9Q96EQ9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Prdm9Q96EQ9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prdm9Q96EQ9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Prdm9Q96EQ9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prdm9Q96EQ9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prdm9Q96EQ9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prdm9Q96EQ9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prdm9Q96EQ9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Prdm9Q96EQ9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prdm9Q96EQ9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prdm9Q96EQ9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prdm9Q96EQ9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Prdm9Q96EQ9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.3■□□□□ 0.52
Prdm9Q96EQ9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prdm9Q96EQ9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Prdm9Q96EQ9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Prdm9Q96EQ9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prdm9Q96EQ9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prdm9Q96EQ9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prdm9Q96EQ9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prdm9Q96EQ9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Prdm9Q96EQ9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Gm20760-201ENSMUST00000179197 648 ntBASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prdm9Q96EQ9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prdm9Q96EQ9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prdm9Q96EQ9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prdm9Q96EQ9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prdm9Q96EQ9 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.27■□□□□ 0.52
Prdm9Q96EQ9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prdm9Q96EQ9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Prdm9Q96EQ9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.27■□□□□ 0.52
Prdm9Q96EQ9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prdm9Q96EQ9 Gm44549-201ENSMUST00000208351 577 ntBASIC18.27■□□□□ 0.52
Prdm9Q96EQ9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prdm9Q96EQ9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prdm9Q96EQ9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prdm9Q96EQ9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prdm9Q96EQ9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prdm9Q96EQ9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prdm9Q96EQ9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prdm9Q96EQ9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prdm9Q96EQ9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Prdm9Q96EQ9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Prdm9Q96EQ9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Prdm9Q96EQ9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prdm9Q96EQ9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prdm9Q96EQ9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prdm9Q96EQ9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms