Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col20a1Q923P0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col20a1Q923P0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col20a1Q923P0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Col20a1Q923P0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col20a1Q923P0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.02■■□□□ 1.12
Col20a1Q923P0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
Col20a1Q923P0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.01■■□□□ 1.11
Col20a1Q923P0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col20a1Q923P0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC22.01■■□□□ 1.11
Col20a1Q923P0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col20a1Q923P0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col20a1Q923P0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col20a1Q923P0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col20a1Q923P0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC22.01■■□□□ 1.11
Col20a1Q923P0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC22.01■■□□□ 1.11
Col20a1Q923P0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC22.01■■□□□ 1.11
Col20a1Q923P0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
Col20a1Q923P0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col20a1Q923P0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col20a1Q923P0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Col20a1Q923P0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col20a1Q923P0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col20a1Q923P0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22■■□□□ 1.11
Col20a1Q923P0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Col20a1Q923P0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Col20a1Q923P0 Gm2399-201ENSMUST00000104944 225 ntBASIC22■■□□□ 1.11
Col20a1Q923P0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col20a1Q923P0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Col20a1Q923P0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col20a1Q923P0 Gm10812-201ENSMUST00000099864 546 ntBASIC22■■□□□ 1.11
Col20a1Q923P0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col20a1Q923P0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col20a1Q923P0 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.99■■□□□ 1.11
Col20a1Q923P0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col20a1Q923P0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Col20a1Q923P0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Col20a1Q923P0 Gm11249-201ENSMUST00000117071 859 ntBASIC21.99■■□□□ 1.11
Col20a1Q923P0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.99■■□□□ 1.11
Col20a1Q923P0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col20a1Q923P0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col20a1Q923P0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col20a1Q923P0 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.98■■□□□ 1.11
Col20a1Q923P0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col20a1Q923P0 Gm5643-201ENSMUST00000117081 966 ntBASIC21.98■■□□□ 1.11
Col20a1Q923P0 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.98■■□□□ 1.11
Col20a1Q923P0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col20a1Q923P0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col20a1Q923P0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col20a1Q923P0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Col20a1Q923P0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col20a1Q923P0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.97■■□□□ 1.11
Col20a1Q923P0 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.97■■□□□ 1.11
Col20a1Q923P0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col20a1Q923P0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Col20a1Q923P0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col20a1Q923P0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Col20a1Q923P0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col20a1Q923P0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col20a1Q923P0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
Col20a1Q923P0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col20a1Q923P0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col20a1Q923P0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col20a1Q923P0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.96■■□□□ 1.11
Col20a1Q923P0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Col20a1Q923P0 Gm22325-201ENSMUST00000158904 308 ntBASIC21.96■■□□□ 1.11
Col20a1Q923P0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Col20a1Q923P0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col20a1Q923P0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.96■■□□□ 1.11
Col20a1Q923P0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col20a1Q923P0 Iqck-206ENSMUST00000208658 2891 ntBASIC21.96■■□□□ 1.11
Col20a1Q923P0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col20a1Q923P0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col20a1Q923P0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col20a1Q923P0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col20a1Q923P0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col20a1Q923P0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col20a1Q923P0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col20a1Q923P0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col20a1Q923P0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.95■■□□□ 1.1
Col20a1Q923P0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.95■■□□□ 1.1
Col20a1Q923P0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col20a1Q923P0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col20a1Q923P0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col20a1Q923P0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col20a1Q923P0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Col20a1Q923P0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Col20a1Q923P0 Gm18666-201ENSMUST00000190039 958 ntBASIC21.94■■□□□ 1.1
Col20a1Q923P0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.94■■□□□ 1.1
Col20a1Q923P0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.94■■□□□ 1.1
Col20a1Q923P0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col20a1Q923P0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col20a1Q923P0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col20a1Q923P0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col20a1Q923P0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col20a1Q923P0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.94■■□□□ 1.1
Col20a1Q923P0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Col20a1Q923P0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Col20a1Q923P0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col20a1Q923P0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms