Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb1Q91Y08 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb1Q91Y08 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.35■□□□□ 0.69
Pcdhb1Q91Y08 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.35■□□□□ 0.69
Pcdhb1Q91Y08 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb1Q91Y08 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb1Q91Y08 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb1Q91Y08 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb1Q91Y08 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb1Q91Y08 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb1Q91Y08 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb1Q91Y08 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb1Q91Y08 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhb1Q91Y08 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb1Q91Y08 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhb1Q91Y08 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb1Q91Y08 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhb1Q91Y08 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb1Q91Y08 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb1Q91Y08 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb1Q91Y08 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb1Q91Y08 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb1Q91Y08 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pcdhb1Q91Y08 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.33■□□□□ 0.69
Pcdhb1Q91Y08 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb1Q91Y08 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb1Q91Y08 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb1Q91Y08 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb1Q91Y08 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb1Q91Y08 Gm10033-202ENSMUST00000211874 928 ntBASIC19.33■□□□□ 0.68
Pcdhb1Q91Y08 Gm5874-201ENSMUST00000096101 508 ntBASIC19.33■□□□□ 0.68
Pcdhb1Q91Y08 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb1Q91Y08 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb1Q91Y08 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pcdhb1Q91Y08 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhb1Q91Y08 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb1Q91Y08 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb1Q91Y08 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb1Q91Y08 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb1Q91Y08 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb1Q91Y08 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb1Q91Y08 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb1Q91Y08 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb1Q91Y08 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb1Q91Y08 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb1Q91Y08 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb1Q91Y08 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.31■□□□□ 0.68
Pcdhb1Q91Y08 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhb1Q91Y08 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb1Q91Y08 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb1Q91Y08 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdhb1Q91Y08 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb1Q91Y08 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb1Q91Y08 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb1Q91Y08 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhb1Q91Y08 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb1Q91Y08 Gm42642-201ENSMUST00000200683 355 ntBASIC19.3■□□□□ 0.68
Pcdhb1Q91Y08 Gm18671-201ENSMUST00000214826 683 ntBASIC19.3■□□□□ 0.68
Pcdhb1Q91Y08 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhb1Q91Y08 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb1Q91Y08 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb1Q91Y08 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb1Q91Y08 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdhb1Q91Y08 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb1Q91Y08 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb1Q91Y08 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb1Q91Y08 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb1Q91Y08 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb1Q91Y08 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms