Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb20Q91XZ9 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.85■□□□□ 0.45
Pcdhb20Q91XZ9 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdhb20Q91XZ9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.85■□□□□ 0.45
Pcdhb20Q91XZ9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb20Q91XZ9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb20Q91XZ9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb20Q91XZ9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb20Q91XZ9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb20Q91XZ9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb20Q91XZ9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb20Q91XZ9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb20Q91XZ9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb20Q91XZ9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb20Q91XZ9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb20Q91XZ9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 CT009764.1-201ENSMUST00000222260 483 ntBASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb20Q91XZ9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhb20Q91XZ9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb20Q91XZ9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb20Q91XZ9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb20Q91XZ9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb20Q91XZ9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb20Q91XZ9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pcdhb20Q91XZ9 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.81■□□□□ 0.44
Pcdhb20Q91XZ9 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Gm26524-201ENSMUST00000192339 390 ntBASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms