Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.44■□□□□ 0.54
Pcdhb4Q91XZ6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdhb4Q91XZ6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb4Q91XZ6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb4Q91XZ6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb4Q91XZ6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb4Q91XZ6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb4Q91XZ6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.42■□□□□ 0.54
Pcdhb4Q91XZ6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb4Q91XZ6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb4Q91XZ6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 Fst-202ENSMUST00000223640 2612 ntBASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.41■□□□□ 0.54
Pcdhb4Q91XZ6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Gm43060-201ENSMUST00000200621 289 ntBASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb4Q91XZ6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb4Q91XZ6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb4Q91XZ6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms