Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgc3Q91XX1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgc3Q91XX1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhgc3Q91XX1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.52■□□□□ 0.4
Pcdhgc3Q91XX1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgc3Q91XX1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.52■□□□□ 0.4
Pcdhgc3Q91XX1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgc3Q91XX1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgc3Q91XX1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgc3Q91XX1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgc3Q91XX1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.52■□□□□ 0.39
Pcdhgc3Q91XX1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgc3Q91XX1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgc3Q91XX1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgc3Q91XX1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgc3Q91XX1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgc3Q91XX1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgc3Q91XX1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgc3Q91XX1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Pcdhgc3Q91XX1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgc3Q91XX1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgc3Q91XX1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgc3Q91XX1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgc3Q91XX1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgc3Q91XX1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Pcdhgc3Q91XX1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgc3Q91XX1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Pcdhgc3Q91XX1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgc3Q91XX1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgc3Q91XX1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgc3Q91XX1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgc3Q91XX1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgc3Q91XX1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.49■□□□□ 0.39
Pcdhgc3Q91XX1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc3Q91XX1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdhgc3Q91XX1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc3Q91XX1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc3Q91XX1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc3Q91XX1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
Pcdhgc3Q91XX1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc3Q91XX1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhgc3Q91XX1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdhgc3Q91XX1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc3Q91XX1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhgc3Q91XX1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc3Q91XX1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc3Q91XX1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms