Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm6576-201ENSMUST00000169678 883 ntBASIC21.42■■□□□ 1.02
Trex1Q91XB0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.42■■□□□ 1.02
Trex1Q91XB0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trex1Q91XB0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trex1Q91XB0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trex1Q91XB0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.42■■□□□ 1.02
Trex1Q91XB0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trex1Q91XB0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trex1Q91XB0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Trex1Q91XB0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trex1Q91XB0 Gm13158-201ENSMUST00000122007 736 ntBASIC21.4■■□□□ 1.02
Trex1Q91XB0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.4■■□□□ 1.02
Trex1Q91XB0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.4■■□□□ 1.02
Trex1Q91XB0 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.4■■□□□ 1.02
Trex1Q91XB0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trex1Q91XB0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Trex1Q91XB0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trex1Q91XB0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Trex1Q91XB0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trex1Q91XB0 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.39■■□□□ 1.01
Trex1Q91XB0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.39■■□□□ 1.01
Trex1Q91XB0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trex1Q91XB0 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.39■■□□□ 1.01
Trex1Q91XB0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trex1Q91XB0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trex1Q91XB0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.39■■□□□ 1.01
Trex1Q91XB0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trex1Q91XB0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trex1Q91XB0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trex1Q91XB0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.38■■□□□ 1.01
Trex1Q91XB0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.38■■□□□ 1.01
Trex1Q91XB0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Trex1Q91XB0 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.38■■□□□ 1.01
Trex1Q91XB0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trex1Q91XB0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trex1Q91XB0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Trex1Q91XB0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trex1Q91XB0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trex1Q91XB0 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.38■■□□□ 1.01
Trex1Q91XB0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trex1Q91XB0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trex1Q91XB0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trex1Q91XB0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trex1Q91XB0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trex1Q91XB0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trex1Q91XB0 Gm11927-201ENSMUST00000118472 759 ntBASIC21.37■■□□□ 1.01
Trex1Q91XB0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.37■■□□□ 1.01
Trex1Q91XB0 Gm15378-201ENSMUST00000121894 207 ntBASIC21.37■■□□□ 1.01
Trex1Q91XB0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trex1Q91XB0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trex1Q91XB0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trex1Q91XB0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trex1Q91XB0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trex1Q91XB0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Trex1Q91XB0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trex1Q91XB0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.36■■□□□ 1.01
Trex1Q91XB0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trex1Q91XB0 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.36■■□□□ 1.01
Trex1Q91XB0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trex1Q91XB0 Flg-201ENSMUST00000050758 1488 ntBASIC21.36■■□□□ 1.01
Trex1Q91XB0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trex1Q91XB0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
Trex1Q91XB0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trex1Q91XB0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Gm715-201ENSMUST00000117865 831 ntBASIC21.35■■□□□ 1.01
Trex1Q91XB0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trex1Q91XB0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trex1Q91XB0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trex1Q91XB0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms