Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vsx1Q91V10 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vsx1Q91V10 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vsx1Q91V10 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vsx1Q91V10 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.42■□□□□ 0.54
Vsx1Q91V10 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vsx1Q91V10 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vsx1Q91V10 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.42■□□□□ 0.54
Vsx1Q91V10 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vsx1Q91V10 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vsx1Q91V10 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vsx1Q91V10 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vsx1Q91V10 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vsx1Q91V10 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vsx1Q91V10 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vsx1Q91V10 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.41■□□□□ 0.54
Vsx1Q91V10 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Vsx1Q91V10 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.41■□□□□ 0.54
Vsx1Q91V10 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vsx1Q91V10 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.41■□□□□ 0.54
Vsx1Q91V10 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
Vsx1Q91V10 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vsx1Q91V10 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vsx1Q91V10 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vsx1Q91V10 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vsx1Q91V10 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vsx1Q91V10 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vsx1Q91V10 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vsx1Q91V10 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vsx1Q91V10 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vsx1Q91V10 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vsx1Q91V10 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vsx1Q91V10 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vsx1Q91V10 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.4■□□□□ 0.54
Vsx1Q91V10 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.4■□□□□ 0.54
Vsx1Q91V10 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vsx1Q91V10 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.4■□□□□ 0.54
Vsx1Q91V10 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vsx1Q91V10 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vsx1Q91V10 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vsx1Q91V10 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.39■□□□□ 0.54
Vsx1Q91V10 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vsx1Q91V10 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vsx1Q91V10 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.39■□□□□ 0.53
Vsx1Q91V10 Mir5122-201ENSMUST00000175004 89 ntBASIC18.39■□□□□ 0.53
Vsx1Q91V10 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vsx1Q91V10 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.39■□□□□ 0.53
Vsx1Q91V10 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vsx1Q91V10 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.39■□□□□ 0.53
Vsx1Q91V10 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vsx1Q91V10 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vsx1Q91V10 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.39■□□□□ 0.53
Vsx1Q91V10 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Vsx1Q91V10 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vsx1Q91V10 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.38■□□□□ 0.53
Vsx1Q91V10 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vsx1Q91V10 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.37■□□□□ 0.53
Vsx1Q91V10 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vsx1Q91V10 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Vsx1Q91V10 Gm6433-201ENSMUST00000118634 875 ntBASIC18.37■□□□□ 0.53
Vsx1Q91V10 Gm43799-201ENSMUST00000201845 579 ntBASIC18.37■□□□□ 0.53
Vsx1Q91V10 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vsx1Q91V10 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vsx1Q91V10 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vsx1Q91V10 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vsx1Q91V10 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vsx1Q91V10 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vsx1Q91V10 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Vsx1Q91V10 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vsx1Q91V10 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vsx1Q91V10 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vsx1Q91V10 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.36■□□□□ 0.53
Vsx1Q91V10 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.36■□□□□ 0.53
Vsx1Q91V10 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vsx1Q91V10 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vsx1Q91V10 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vsx1Q91V10 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Vsx1Q91V10 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vsx1Q91V10 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.35■□□□□ 0.53
Vsx1Q91V10 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms