Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
StrcQ8VIM6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
StrcQ8VIM6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
StrcQ8VIM6 Gm18959-201ENSMUST00000208954 655 ntBASIC22.57■■□□□ 1.2
StrcQ8VIM6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
StrcQ8VIM6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
StrcQ8VIM6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
StrcQ8VIM6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
StrcQ8VIM6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
StrcQ8VIM6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
StrcQ8VIM6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
StrcQ8VIM6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
StrcQ8VIM6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
StrcQ8VIM6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
StrcQ8VIM6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
StrcQ8VIM6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
StrcQ8VIM6 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.55■■□□□ 1.2
StrcQ8VIM6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
StrcQ8VIM6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
StrcQ8VIM6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
StrcQ8VIM6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
StrcQ8VIM6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
StrcQ8VIM6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
StrcQ8VIM6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
StrcQ8VIM6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
StrcQ8VIM6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
StrcQ8VIM6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
StrcQ8VIM6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC22.54■■□□□ 1.2
StrcQ8VIM6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
StrcQ8VIM6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
StrcQ8VIM6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
StrcQ8VIM6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
StrcQ8VIM6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
StrcQ8VIM6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
StrcQ8VIM6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
StrcQ8VIM6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
StrcQ8VIM6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
StrcQ8VIM6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
StrcQ8VIM6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC22.52■■□□□ 1.2
StrcQ8VIM6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
StrcQ8VIM6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
StrcQ8VIM6 AC159205.6-201ENSMUST00000224935 887 ntBASIC22.52■■□□□ 1.2
StrcQ8VIM6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
StrcQ8VIM6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC22.52■■□□□ 1.2
StrcQ8VIM6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
StrcQ8VIM6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.52■■□□□ 1.2
StrcQ8VIM6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
StrcQ8VIM6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.19
StrcQ8VIM6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
StrcQ8VIM6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
StrcQ8VIM6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
StrcQ8VIM6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC22.51■■□□□ 1.19
StrcQ8VIM6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
StrcQ8VIM6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
StrcQ8VIM6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.51■■□□□ 1.19
StrcQ8VIM6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
StrcQ8VIM6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
StrcQ8VIM6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
StrcQ8VIM6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
StrcQ8VIM6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
StrcQ8VIM6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
StrcQ8VIM6 Gm14464-201ENSMUST00000119658 1254 ntBASIC22.5■■□□□ 1.19
StrcQ8VIM6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
StrcQ8VIM6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
StrcQ8VIM6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC22.5■■□□□ 1.19
StrcQ8VIM6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
StrcQ8VIM6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
StrcQ8VIM6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
StrcQ8VIM6 AA414768-201ENSMUST00000121924 1257 ntBASIC22.5■■□□□ 1.19
StrcQ8VIM6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
StrcQ8VIM6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
StrcQ8VIM6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
StrcQ8VIM6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
StrcQ8VIM6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
StrcQ8VIM6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
StrcQ8VIM6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
StrcQ8VIM6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.48■■□□□ 1.19
StrcQ8VIM6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
StrcQ8VIM6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
StrcQ8VIM6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
StrcQ8VIM6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
StrcQ8VIM6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC22.48■■□□□ 1.19
StrcQ8VIM6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
StrcQ8VIM6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
StrcQ8VIM6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
StrcQ8VIM6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC22.48■■□□□ 1.19
StrcQ8VIM6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
StrcQ8VIM6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
StrcQ8VIM6 Ank2-226ENSMUST00000189368 339 ntBASIC22.47■■□□□ 1.19
StrcQ8VIM6 Gm38285-201ENSMUST00000192928 922 ntBASIC22.47■■□□□ 1.19
StrcQ8VIM6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
StrcQ8VIM6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
StrcQ8VIM6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
StrcQ8VIM6 Gm17971-201ENSMUST00000190239 806 ntBASIC22.47■■□□□ 1.19
StrcQ8VIM6 AC154471.1-201ENSMUST00000224418 436 ntBASIC22.47■■□□□ 1.19
StrcQ8VIM6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
StrcQ8VIM6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
StrcQ8VIM6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
StrcQ8VIM6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
StrcQ8VIM6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms