Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40bQ8VHP8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40bQ8VHP8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Golgb1-201ENSMUST00000023534 498 ntBASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab40bQ8VHP8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40bQ8VHP8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40bQ8VHP8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40bQ8VHP8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rab40bQ8VHP8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Rab40bQ8VHP8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40bQ8VHP8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40bQ8VHP8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40bQ8VHP8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40bQ8VHP8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40bQ8VHP8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40bQ8VHP8 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.71■□□□□ 0.27
Rab40bQ8VHP8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab40bQ8VHP8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rab40bQ8VHP8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab40bQ8VHP8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rab40bQ8VHP8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab40bQ8VHP8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Gm7860-201ENSMUST00000121190 879 ntBASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Rab40bQ8VHP8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40bQ8VHP8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms