Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gm2559-201ENSMUST00000201323 363 ntBASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdhr1Q8VHP6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Gm10812-201ENSMUST00000099864 546 ntBASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr1Q8VHP6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr1Q8VHP6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr1Q8VHP6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Cdhr1Q8VHP6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cdhr1Q8VHP6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdhr1Q8VHP6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdhr1Q8VHP6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdhr1Q8VHP6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdhr1Q8VHP6 Gm44549-201ENSMUST00000208351 577 ntBASIC18.1■□□□□ 0.49
Cdhr1Q8VHP6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.1■□□□□ 0.49
Cdhr1Q8VHP6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cdhr1Q8VHP6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdhr1Q8VHP6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdhr1Q8VHP6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdhr1Q8VHP6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cdhr1Q8VHP6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr1Q8VHP6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr1Q8VHP6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr1Q8VHP6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr1Q8VHP6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr1Q8VHP6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.09■□□□□ 0.49
Cdhr1Q8VHP6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.09■□□□□ 0.49
Cdhr1Q8VHP6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr1Q8VHP6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr1Q8VHP6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr1Q8VHP6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.09■□□□□ 0.49
Cdhr1Q8VHP6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Cdhr1Q8VHP6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Cdhr1Q8VHP6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Cdhr1Q8VHP6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Cdhr1Q8VHP6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdhr1Q8VHP6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdhr1Q8VHP6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cdhr1Q8VHP6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr1Q8VHP6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr1Q8VHP6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.08■□□□□ 0.48
Cdhr1Q8VHP6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.08■□□□□ 0.48
Cdhr1Q8VHP6 Gm10252-201ENSMUST00000209541 832 ntBASIC18.08■□□□□ 0.48
Cdhr1Q8VHP6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr1Q8VHP6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr1Q8VHP6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr1Q8VHP6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr1Q8VHP6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.07■□□□□ 0.48
Cdhr1Q8VHP6 Dio3-201ENSMUST00000097228 1449 ntBASIC18.07■□□□□ 0.48
Cdhr1Q8VHP6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr1Q8VHP6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms