Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
HnrnpuQ8VEK3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.2■■□□□ 1.3
HnrnpuQ8VEK3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.2■■□□□ 1.3
HnrnpuQ8VEK3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
HnrnpuQ8VEK3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
HnrnpuQ8VEK3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HnrnpuQ8VEK3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
HnrnpuQ8VEK3 Gm15853-202ENSMUST00000195518 2041 ntBASIC23.2■■□□□ 1.3
HnrnpuQ8VEK3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HnrnpuQ8VEK3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HnrnpuQ8VEK3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Gm26971-201ENSMUST00000182423 1072 ntBASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HnrnpuQ8VEK3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HnrnpuQ8VEK3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
HnrnpuQ8VEK3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HnrnpuQ8VEK3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HnrnpuQ8VEK3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
HnrnpuQ8VEK3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HnrnpuQ8VEK3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HnrnpuQ8VEK3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC23.18■■□□□ 1.3
HnrnpuQ8VEK3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC23.18■■□□□ 1.3
HnrnpuQ8VEK3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
HnrnpuQ8VEK3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC23.18■■□□□ 1.3
HnrnpuQ8VEK3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HnrnpuQ8VEK3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC23.17■■□□□ 1.3
HnrnpuQ8VEK3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HnrnpuQ8VEK3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HnrnpuQ8VEK3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
HnrnpuQ8VEK3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HnrnpuQ8VEK3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
HnrnpuQ8VEK3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
HnrnpuQ8VEK3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
HnrnpuQ8VEK3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HnrnpuQ8VEK3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HnrnpuQ8VEK3 Gm5874-201ENSMUST00000096101 508 ntBASIC23.14■■□□□ 1.29
HnrnpuQ8VEK3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
HnrnpuQ8VEK3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HnrnpuQ8VEK3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HnrnpuQ8VEK3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HnrnpuQ8VEK3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HnrnpuQ8VEK3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
HnrnpuQ8VEK3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC23.13■■□□□ 1.29
HnrnpuQ8VEK3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HnrnpuQ8VEK3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC23.13■■□□□ 1.29
HnrnpuQ8VEK3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HnrnpuQ8VEK3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HnrnpuQ8VEK3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HnrnpuQ8VEK3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
HnrnpuQ8VEK3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HnrnpuQ8VEK3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23.12■■□□□ 1.29
HnrnpuQ8VEK3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.12■■□□□ 1.29
HnrnpuQ8VEK3 Gm18671-201ENSMUST00000214826 683 ntBASIC23.12■■□□□ 1.29
HnrnpuQ8VEK3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HnrnpuQ8VEK3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HnrnpuQ8VEK3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HnrnpuQ8VEK3 Gm10167-201ENSMUST00000150411 1479 ntBASIC23.11■■□□□ 1.29
HnrnpuQ8VEK3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HnrnpuQ8VEK3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC23.11■■□□□ 1.29
HnrnpuQ8VEK3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
HnrnpuQ8VEK3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HnrnpuQ8VEK3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HnrnpuQ8VEK3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
HnrnpuQ8VEK3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HnrnpuQ8VEK3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
HnrnpuQ8VEK3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC23.1■■□□□ 1.29
HnrnpuQ8VEK3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HnrnpuQ8VEK3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HnrnpuQ8VEK3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.1■■□□□ 1.29
HnrnpuQ8VEK3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms