Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps4aQ8VEJ9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Vps4aQ8VEJ9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Gm12933-201ENSMUST00000120203 872 ntBASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps4aQ8VEJ9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Gm11421-201ENSMUST00000122124 294 ntBASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps4aQ8VEJ9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Vps4aQ8VEJ9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
Vps4aQ8VEJ9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vps4aQ8VEJ9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4aQ8VEJ9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4aQ8VEJ9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps4aQ8VEJ9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4aQ8VEJ9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4aQ8VEJ9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4aQ8VEJ9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4aQ8VEJ9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps4aQ8VEJ9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4aQ8VEJ9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4aQ8VEJ9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps4aQ8VEJ9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps4aQ8VEJ9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps4aQ8VEJ9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.93■□□□□ 0.46
Vps4aQ8VEJ9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps4aQ8VEJ9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.92■□□□□ 0.46
Vps4aQ8VEJ9 Gm9988-201ENSMUST00000069786 435 ntBASIC17.92■□□□□ 0.46
Vps4aQ8VEJ9 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.92■□□□□ 0.46
Vps4aQ8VEJ9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.92■□□□□ 0.46
Vps4aQ8VEJ9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.92■□□□□ 0.46
Vps4aQ8VEJ9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps4aQ8VEJ9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps4aQ8VEJ9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps4aQ8VEJ9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Vps4aQ8VEJ9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Vps4aQ8VEJ9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms