Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q8VDP2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q8VDP2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q8VDP2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Q8VDP2 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.11■□□□□ 0.49
Q8VDP2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q8VDP2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q8VDP2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q8VDP2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q8VDP2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Q8VDP2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q8VDP2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Q8VDP2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Q8VDP2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Q8VDP2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Q8VDP2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q8VDP2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.1■□□□□ 0.49
Q8VDP2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q8VDP2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Q8VDP2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Q8VDP2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q8VDP2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q8VDP2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q8VDP2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Q8VDP2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q8VDP2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q8VDP2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q8VDP2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Q8VDP2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q8VDP2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q8VDP2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Q8VDP2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q8VDP2 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.09■□□□□ 0.49
Q8VDP2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q8VDP2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Q8VDP2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q8VDP2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q8VDP2 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.09■□□□□ 0.49
Q8VDP2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Q8VDP2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.09■□□□□ 0.49
Q8VDP2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q8VDP2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q8VDP2 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.09■□□□□ 0.49
Q8VDP2 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.09■□□□□ 0.49
Q8VDP2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Q8VDP2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q8VDP2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Q8VDP2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Q8VDP2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Q8VDP2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Q8VDP2 Gm5812-201ENSMUST00000061073 957 ntBASIC18.08■□□□□ 0.48
Q8VDP2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Q8VDP2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Q8VDP2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Q8VDP2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Q8VDP2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Q8VDP2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Q8VDP2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Q8VDP2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q8VDP2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q8VDP2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q8VDP2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q8VDP2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q8VDP2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Q8VDP2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Q8VDP2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Q8VDP2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Q8VDP2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Q8VDP2 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.06■□□□□ 0.48
Q8VDP2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q8VDP2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q8VDP2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.06■□□□□ 0.48
Q8VDP2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q8VDP2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Q8VDP2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Q8VDP2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q8VDP2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.06■□□□□ 0.48
Q8VDP2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q8VDP2 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.06■□□□□ 0.48
Q8VDP2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q8VDP2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q8VDP2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Q8VDP2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.06■□□□□ 0.48
Q8VDP2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Q8VDP2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Q8VDP2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Q8VDP2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q8VDP2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.05■□□□□ 0.48
Q8VDP2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Q8VDP2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Q8VDP2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q8VDP2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.05■□□□□ 0.48
Q8VDP2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Q8VDP2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Q8VDP2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.05■□□□□ 0.48
Q8VDP2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q8VDP2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Q8VDP2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q8VDP2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q8VDP2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms