Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cd109Q8R422 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cd109Q8R422 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Cd109Q8R422 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Cd109Q8R422 AC175538.1-201ENSMUST00000225343 1269 ntBASIC26.56■■□□□ 1.84
Cd109Q8R422 AC107452.1-201ENSMUST00000227963 481 ntBASIC26.56■■□□□ 1.84
Cd109Q8R422 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cd109Q8R422 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cd109Q8R422 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cd109Q8R422 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Cd109Q8R422 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Cd109Q8R422 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cd109Q8R422 Krtap5-1-202ENSMUST00000188274 742 ntBASIC26.56■■□□□ 1.84
Cd109Q8R422 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cd109Q8R422 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC26.56■■□□□ 1.84
Cd109Q8R422 Zfp783-201ENSMUST00000095946 670 ntBASIC26.56■■□□□ 1.84
Cd109Q8R422 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cd109Q8R422 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Cd109Q8R422 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cd109Q8R422 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC26.55■■□□□ 1.84
Cd109Q8R422 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cd109Q8R422 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC26.55■■□□□ 1.84
Cd109Q8R422 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cd109Q8R422 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cd109Q8R422 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
Cd109Q8R422 Gm15565-201ENSMUST00000118890 427 ntBASIC26.55■■□□□ 1.84
Cd109Q8R422 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC26.55■■□□□ 1.84
Cd109Q8R422 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC26.55■■□□□ 1.84
Cd109Q8R422 Mtag2-201ENSMUST00000058665 714 ntBASIC26.55■■□□□ 1.84
Cd109Q8R422 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cd109Q8R422 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cd109Q8R422 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC26.54■■□□□ 1.84
Cd109Q8R422 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC26.54■■□□□ 1.84
Cd109Q8R422 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cd109Q8R422 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cd109Q8R422 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cd109Q8R422 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cd109Q8R422 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Cd109Q8R422 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cd109Q8R422 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
Cd109Q8R422 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC26.54■■□□□ 1.84
Cd109Q8R422 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cd109Q8R422 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cd109Q8R422 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cd109Q8R422 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Cd109Q8R422 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cd109Q8R422 Mir5122-201ENSMUST00000175004 89 ntBASIC26.53■■□□□ 1.84
Cd109Q8R422 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC26.53■■□□□ 1.84
Cd109Q8R422 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Cd109Q8R422 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cd109Q8R422 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cd109Q8R422 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Cd109Q8R422 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC26.52■■□□□ 1.84
Cd109Q8R422 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cd109Q8R422 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cd109Q8R422 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cd109Q8R422 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cd109Q8R422 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cd109Q8R422 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC26.51■■□□□ 1.83
Cd109Q8R422 Gm13836-201ENSMUST00000121159 501 ntBASIC26.51■■□□□ 1.83
Cd109Q8R422 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC26.51■■□□□ 1.83
Cd109Q8R422 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cd109Q8R422 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Cd109Q8R422 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC26.5■■□□□ 1.83
Cd109Q8R422 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
Cd109Q8R422 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
Cd109Q8R422 Gm29994-201ENSMUST00000195495 1193 ntBASIC26.5■■□□□ 1.83
Cd109Q8R422 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cd109Q8R422 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Cd109Q8R422 AC135963.1-201ENSMUST00000211640 717 ntBASIC26.5■■□□□ 1.83
Cd109Q8R422 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cd109Q8R422 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cd109Q8R422 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC26.49■■□□□ 1.83
Cd109Q8R422 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Cd109Q8R422 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC26.49■■□□□ 1.83
Cd109Q8R422 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cd109Q8R422 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cd109Q8R422 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cd109Q8R422 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cd109Q8R422 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cd109Q8R422 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cd109Q8R422 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cd109Q8R422 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Cd109Q8R422 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cd109Q8R422 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC26.48■■□□□ 1.83
Cd109Q8R422 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC26.48■■□□□ 1.83
Cd109Q8R422 Gm37805-201ENSMUST00000192612 1094 ntBASIC26.48■■□□□ 1.83
Cd109Q8R422 Gm7977-201ENSMUST00000193787 748 ntBASIC26.48■■□□□ 1.83
Cd109Q8R422 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Cd109Q8R422 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cd109Q8R422 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cd109Q8R422 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cd109Q8R422 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Cd109Q8R422 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Cd109Q8R422 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cd109Q8R422 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Cd109Q8R422 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Cd109Q8R422 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Cd109Q8R422 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Cd109Q8R422 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms