Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r28Q8R2C9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Gm12933-201ENSMUST00000120203 872 ntBASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Vmn1r28Q8R2C9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r28Q8R2C9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r28Q8R2C9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r28Q8R2C9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r28Q8R2C9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r28Q8R2C9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r28Q8R2C9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r28Q8R2C9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r28Q8R2C9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r28Q8R2C9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Vmn1r28Q8R2C9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r28Q8R2C9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r28Q8R2C9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Gm7290-201ENSMUST00000104990 617 ntBASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Gm12918-201ENSMUST00000120234 636 ntBASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Gm15710-201ENSMUST00000121821 636 ntBASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Gm5075-201ENSMUST00000196916 622 ntBASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vmn1r28Q8R2C9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vmn1r28Q8R2C9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms