Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Rpp40Q8R1F9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 BC021767-201ENSMUST00000126387 1716 ntBASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpp40Q8R1F9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp40Q8R1F9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpp40Q8R1F9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpp40Q8R1F9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpp40Q8R1F9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpp40Q8R1F9 Gm12441-201ENSMUST00000121806 588 ntBASIC19.95■□□□□ 0.78
Rpp40Q8R1F9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpp40Q8R1F9 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.95■□□□□ 0.78
Rpp40Q8R1F9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpp40Q8R1F9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rpp40Q8R1F9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rpp40Q8R1F9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rpp40Q8R1F9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpp40Q8R1F9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpp40Q8R1F9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp40Q8R1F9 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Rab3c-203ENSMUST00000224180 967 ntBASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.93■□□□□ 0.78
Rpp40Q8R1F9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms