Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Zc3h3Q8CHP0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Zc3h3Q8CHP0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Zc3h3Q8CHP0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zc3h3Q8CHP0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zc3h3Q8CHP0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Zc3h3Q8CHP0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Zc3h3Q8CHP0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Zc3h3Q8CHP0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zc3h3Q8CHP0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zc3h3Q8CHP0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Zc3h3Q8CHP0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Zc3h3Q8CHP0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Zc3h3Q8CHP0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Zc3h3Q8CHP0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3h3Q8CHP0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3h3Q8CHP0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3h3Q8CHP0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3h3Q8CHP0 Zfp783-201ENSMUST00000095946 670 ntBASIC18.3■□□□□ 0.52
Zc3h3Q8CHP0 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.3■□□□□ 0.52
Zc3h3Q8CHP0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3h3Q8CHP0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3h3Q8CHP0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3h3Q8CHP0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Zc3h3Q8CHP0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Gm15375-201ENSMUST00000119510 849 ntBASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Gm17971-201ENSMUST00000190239 806 ntBASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Gm45058-201ENSMUST00000205810 766 ntBASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.29■□□□□ 0.52
Zc3h3Q8CHP0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Zc3h3Q8CHP0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Zc3h3Q8CHP0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zc3h3Q8CHP0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Zc3h3Q8CHP0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zc3h3Q8CHP0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zc3h3Q8CHP0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zc3h3Q8CHP0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.27■□□□□ 0.52
Zc3h3Q8CHP0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Zc3h3Q8CHP0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Zc3h3Q8CHP0 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.27■□□□□ 0.52
Zc3h3Q8CHP0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zc3h3Q8CHP0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zc3h3Q8CHP0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zc3h3Q8CHP0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Zc3h3Q8CHP0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Zc3h3Q8CHP0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Zc3h3Q8CHP0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Zc3h3Q8CHP0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Zc3h3Q8CHP0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zc3h3Q8CHP0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.25■□□□□ 0.51
Zc3h3Q8CHP0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.25■□□□□ 0.51
Zc3h3Q8CHP0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Zc3h3Q8CHP0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zc3h3Q8CHP0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Zc3h3Q8CHP0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zc3h3Q8CHP0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zc3h3Q8CHP0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zc3h3Q8CHP0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zc3h3Q8CHP0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zc3h3Q8CHP0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms