Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ShfQ8CG80 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShfQ8CG80 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ShfQ8CG80 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ShfQ8CG80 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShfQ8CG80 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.6■□□□□ 0.25
ShfQ8CG80 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShfQ8CG80 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ShfQ8CG80 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ShfQ8CG80 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShfQ8CG80 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShfQ8CG80 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.6■□□□□ 0.25
ShfQ8CG80 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShfQ8CG80 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShfQ8CG80 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShfQ8CG80 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ShfQ8CG80 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ShfQ8CG80 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.6■□□□□ 0.25
ShfQ8CG80 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ShfQ8CG80 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ShfQ8CG80 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.59■□□□□ 0.25
ShfQ8CG80 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.59■□□□□ 0.25
ShfQ8CG80 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ShfQ8CG80 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShfQ8CG80 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShfQ8CG80 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ShfQ8CG80 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShfQ8CG80 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShfQ8CG80 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShfQ8CG80 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.59■□□□□ 0.25
ShfQ8CG80 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ShfQ8CG80 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ShfQ8CG80 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
ShfQ8CG80 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
ShfQ8CG80 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ShfQ8CG80 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.58■□□□□ 0.24
ShfQ8CG80 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ShfQ8CG80 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ShfQ8CG80 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ShfQ8CG80 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ShfQ8CG80 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ShfQ8CG80 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.58■□□□□ 0.24
ShfQ8CG80 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.58■□□□□ 0.24
ShfQ8CG80 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ShfQ8CG80 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ShfQ8CG80 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ShfQ8CG80 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ShfQ8CG80 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.58■□□□□ 0.24
ShfQ8CG80 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ShfQ8CG80 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ShfQ8CG80 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShfQ8CG80 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShfQ8CG80 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.57■□□□□ 0.24
ShfQ8CG80 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShfQ8CG80 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ShfQ8CG80 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShfQ8CG80 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ShfQ8CG80 Gm26833-201ENSMUST00000180899 440 ntBASIC16.57■□□□□ 0.24
ShfQ8CG80 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShfQ8CG80 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShfQ8CG80 Gm6139-201ENSMUST00000079261 882 ntBASIC16.57■□□□□ 0.24
ShfQ8CG80 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShfQ8CG80 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ShfQ8CG80 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ShfQ8CG80 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShfQ8CG80 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShfQ8CG80 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShfQ8CG80 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ShfQ8CG80 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShfQ8CG80 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ShfQ8CG80 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
ShfQ8CG80 Gm38205-201ENSMUST00000192243 258 ntBASIC16.56■□□□□ 0.24
ShfQ8CG80 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.56■□□□□ 0.24
ShfQ8CG80 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShfQ8CG80 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShfQ8CG80 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShfQ8CG80 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShfQ8CG80 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShfQ8CG80 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShfQ8CG80 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.55■□□□□ 0.24
ShfQ8CG80 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShfQ8CG80 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.55■□□□□ 0.24
ShfQ8CG80 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShfQ8CG80 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShfQ8CG80 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShfQ8CG80 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
ShfQ8CG80 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShfQ8CG80 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ShfQ8CG80 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShfQ8CG80 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ShfQ8CG80 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.55■□□□□ 0.24
ShfQ8CG80 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.55■□□□□ 0.24
ShfQ8CG80 Gm27454-201ENSMUST00000185090 204 ntBASIC16.55■□□□□ 0.24
ShfQ8CG80 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.55■□□□□ 0.24
ShfQ8CG80 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ShfQ8CG80 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.55■□□□□ 0.24
ShfQ8CG80 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShfQ8CG80 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.55■□□□□ 0.24
ShfQ8CG80 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShfQ8CG80 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms