Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab43Q8CG50 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab43Q8CG50 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.13■□□□□ 0.49
Rab43Q8CG50 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab43Q8CG50 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rab43Q8CG50 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab43Q8CG50 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab43Q8CG50 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.11■□□□□ 0.49
Rab43Q8CG50 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.11■□□□□ 0.49
Rab43Q8CG50 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab43Q8CG50 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab43Q8CG50 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.11■□□□□ 0.49
Rab43Q8CG50 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab43Q8CG50 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab43Q8CG50 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.1■□□□□ 0.49
Rab43Q8CG50 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab43Q8CG50 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab43Q8CG50 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab43Q8CG50 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab43Q8CG50 Gm15378-201ENSMUST00000121894 207 ntBASIC18.1■□□□□ 0.49
Rab43Q8CG50 Gm13158-201ENSMUST00000122007 736 ntBASIC18.1■□□□□ 0.49
Rab43Q8CG50 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rab43Q8CG50 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rab43Q8CG50 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab43Q8CG50 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab43Q8CG50 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.1■□□□□ 0.49
Rab43Q8CG50 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rab43Q8CG50 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab43Q8CG50 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab43Q8CG50 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rab43Q8CG50 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab43Q8CG50 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab43Q8CG50 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.09■□□□□ 0.49
Rab43Q8CG50 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rab43Q8CG50 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rab43Q8CG50 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.09■□□□□ 0.49
Rab43Q8CG50 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.09■□□□□ 0.49
Rab43Q8CG50 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rab43Q8CG50 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab43Q8CG50 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab43Q8CG50 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Rab43Q8CG50 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rab43Q8CG50 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.08■□□□□ 0.49
Rab43Q8CG50 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rab43Q8CG50 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rab43Q8CG50 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Rab43Q8CG50 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rab43Q8CG50 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab43Q8CG50 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab43Q8CG50 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab43Q8CG50 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rab43Q8CG50 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab43Q8CG50 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.08■□□□□ 0.48
Rab43Q8CG50 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Gm10698-201ENSMUST00000182663 604 ntBASIC18.07■□□□□ 0.48
Rab43Q8CG50 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.07■□□□□ 0.48
Rab43Q8CG50 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.07■□□□□ 0.48
Rab43Q8CG50 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms