Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc28bQ8CEG5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc28bQ8CEG5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc28bQ8CEG5 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.33■□□□□ 0.53
Ccdc28bQ8CEG5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc28bQ8CEG5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc28bQ8CEG5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc28bQ8CEG5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ccdc28bQ8CEG5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc28bQ8CEG5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ccdc28bQ8CEG5 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.33■□□□□ 0.52
Ccdc28bQ8CEG5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc28bQ8CEG5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc28bQ8CEG5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc28bQ8CEG5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc28bQ8CEG5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ccdc28bQ8CEG5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc28bQ8CEG5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc28bQ8CEG5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ccdc28bQ8CEG5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc28bQ8CEG5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc28bQ8CEG5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.32■□□□□ 0.52
Ccdc28bQ8CEG5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ccdc28bQ8CEG5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc28bQ8CEG5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc28bQ8CEG5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc28bQ8CEG5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc28bQ8CEG5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc28bQ8CEG5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Gm5812-201ENSMUST00000061073 957 ntBASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc28bQ8CEG5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc28bQ8CEG5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Gm9959-201ENSMUST00000068277 390 ntBASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc28bQ8CEG5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Ccdc28bQ8CEG5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.28■□□□□ 0.52
Ccdc28bQ8CEG5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms