Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc87Q8CDL9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc87Q8CDL9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc87Q8CDL9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Ccdc87Q8CDL9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc87Q8CDL9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc87Q8CDL9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc87Q8CDL9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc87Q8CDL9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc87Q8CDL9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc87Q8CDL9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ccdc87Q8CDL9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc87Q8CDL9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc87Q8CDL9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc87Q8CDL9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Ccdc87Q8CDL9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Ccdc87Q8CDL9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc87Q8CDL9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc87Q8CDL9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc87Q8CDL9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc87Q8CDL9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc87Q8CDL9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc87Q8CDL9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Smad6-203ENSMUST00000179458 273 ntBASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ccdc87Q8CDL9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc87Q8CDL9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 Gm40848-201ENSMUST00000221998 324 ntBASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc87Q8CDL9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc87Q8CDL9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccdc87Q8CDL9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc87Q8CDL9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.65■□□□□ 0.74
Ccdc87Q8CDL9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.65■□□□□ 0.74
Ccdc87Q8CDL9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc87Q8CDL9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc87Q8CDL9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc87Q8CDL9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc87Q8CDL9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ccdc87Q8CDL9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc87Q8CDL9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc87Q8CDL9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc87Q8CDL9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.64■□□□□ 0.74
Ccdc87Q8CDL9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc87Q8CDL9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms