Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.36■□□□□ 0.85
Prpf31Q8CCF0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.36■□□□□ 0.85
Prpf31Q8CCF0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf31Q8CCF0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf31Q8CCF0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf31Q8CCF0 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.35■□□□□ 0.85
Prpf31Q8CCF0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf31Q8CCF0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Prpf31Q8CCF0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.35■□□□□ 0.85
Prpf31Q8CCF0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf31Q8CCF0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf31Q8CCF0 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.35■□□□□ 0.85
Prpf31Q8CCF0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf31Q8CCF0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf31Q8CCF0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Gm20049-201ENSMUST00000219950 730 ntBASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf31Q8CCF0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf31Q8CCF0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf31Q8CCF0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf31Q8CCF0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf31Q8CCF0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.33■□□□□ 0.85
Prpf31Q8CCF0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Prpf31Q8CCF0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.33■□□□□ 0.85
Prpf31Q8CCF0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.33■□□□□ 0.85
Prpf31Q8CCF0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.33■□□□□ 0.85
Prpf31Q8CCF0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Prpf31Q8CCF0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf31Q8CCF0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf31Q8CCF0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf31Q8CCF0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Prpf31Q8CCF0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf31Q8CCF0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf31Q8CCF0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf31Q8CCF0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf31Q8CCF0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf31Q8CCF0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf31Q8CCF0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Prpf31Q8CCF0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf31Q8CCF0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf31Q8CCF0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf31Q8CCF0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf31Q8CCF0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf31Q8CCF0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.3■□□□□ 0.84
Prpf31Q8CCF0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf31Q8CCF0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf31Q8CCF0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf31Q8CCF0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf31Q8CCF0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf31Q8CCF0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.3■□□□□ 0.84
Prpf31Q8CCF0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Prpf31Q8CCF0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf31Q8CCF0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf31Q8CCF0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf31Q8CCF0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Prpf31Q8CCF0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf31Q8CCF0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf31Q8CCF0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf31Q8CCF0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.29■□□□□ 0.84
Prpf31Q8CCF0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.29■□□□□ 0.84
Prpf31Q8CCF0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf31Q8CCF0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.29■□□□□ 0.84
Prpf31Q8CCF0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf31Q8CCF0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf31Q8CCF0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Prpf31Q8CCF0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf31Q8CCF0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Prpf31Q8CCF0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.28■□□□□ 0.84
Prpf31Q8CCF0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Prpf31Q8CCF0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Prpf31Q8CCF0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.28■□□□□ 0.84
Prpf31Q8CCF0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms