Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtp1Q8C8C1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtp1Q8C8C1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.34■■□□□ 1.01
Rtp1Q8C8C1 Gm21814-202ENSMUST00000203277 873 ntBASIC21.34■■□□□ 1.01
Rtp1Q8C8C1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rtp1Q8C8C1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtp1Q8C8C1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rtp1Q8C8C1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Rtp1Q8C8C1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtp1Q8C8C1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtp1Q8C8C1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtp1Q8C8C1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtp1Q8C8C1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rtp1Q8C8C1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rtp1Q8C8C1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rtp1Q8C8C1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtp1Q8C8C1 Gm13559-201ENSMUST00000120476 863 ntBASIC21.33■■□□□ 1.01
Rtp1Q8C8C1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Rtp1Q8C8C1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rtp1Q8C8C1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rtp1Q8C8C1 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.33■■□□□ 1.01
Rtp1Q8C8C1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtp1Q8C8C1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtp1Q8C8C1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtp1Q8C8C1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rtp1Q8C8C1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Rtp1Q8C8C1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Rtp1Q8C8C1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rtp1Q8C8C1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtp1Q8C8C1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.32■■□□□ 1
Rtp1Q8C8C1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtp1Q8C8C1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rtp1Q8C8C1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rtp1Q8C8C1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.32■■□□□ 1
Rtp1Q8C8C1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.32■■□□□ 1
Rtp1Q8C8C1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtp1Q8C8C1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.32■■□□□ 1
Rtp1Q8C8C1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtp1Q8C8C1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtp1Q8C8C1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtp1Q8C8C1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtp1Q8C8C1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtp1Q8C8C1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtp1Q8C8C1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rtp1Q8C8C1 Gm11927-201ENSMUST00000118472 759 ntBASIC21.31■■□□□ 1
Rtp1Q8C8C1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtp1Q8C8C1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.31■■□□□ 1
Rtp1Q8C8C1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.31■■□□□ 1
Rtp1Q8C8C1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rtp1Q8C8C1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rtp1Q8C8C1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rtp1Q8C8C1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rtp1Q8C8C1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rtp1Q8C8C1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtp1Q8C8C1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtp1Q8C8C1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtp1Q8C8C1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtp1Q8C8C1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtp1Q8C8C1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtp1Q8C8C1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rtp1Q8C8C1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtp1Q8C8C1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Rtp1Q8C8C1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtp1Q8C8C1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtp1Q8C8C1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Rtp1Q8C8C1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Rtp1Q8C8C1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtp1Q8C8C1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtp1Q8C8C1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.29■■□□□ 1
Rtp1Q8C8C1 Gm11539-201ENSMUST00000119837 557 ntBASIC21.29■■□□□ 1
Rtp1Q8C8C1 Gm13436-201ENSMUST00000120418 567 ntBASIC21.29■■□□□ 1
Rtp1Q8C8C1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtp1Q8C8C1 Gm10517-202ENSMUST00000192970 758 ntBASIC21.29■■□□□ 1
Rtp1Q8C8C1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.29■■□□□ 1
Rtp1Q8C8C1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtp1Q8C8C1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtp1Q8C8C1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtp1Q8C8C1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtp1Q8C8C1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Rtp1Q8C8C1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtp1Q8C8C1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtp1Q8C8C1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtp1Q8C8C1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Rtp1Q8C8C1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.28■■□□□ 1
Rtp1Q8C8C1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rtp1Q8C8C1 Gm7889-201ENSMUST00000185591 958 ntBASIC21.28■■□□□ 1
Rtp1Q8C8C1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtp1Q8C8C1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtp1Q8C8C1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtp1Q8C8C1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rtp1Q8C8C1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtp1Q8C8C1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtp1Q8C8C1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rtp1Q8C8C1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rtp1Q8C8C1 Flg-201ENSMUST00000050758 1488 ntBASIC21.27■■□□□ 1
Rtp1Q8C8C1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rtp1Q8C8C1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtp1Q8C8C1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.27■■□□□ 1
Rtp1Q8C8C1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.27■■□□□ 1
Rtp1Q8C8C1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms