Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cfap54Q8C6S9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.01■□□□□ 0.47
Cfap54Q8C6S9 Gm13158-201ENSMUST00000122007 736 ntBASIC18.01■□□□□ 0.47
Cfap54Q8C6S9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap54Q8C6S9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap54Q8C6S9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap54Q8C6S9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap54Q8C6S9 Gm6728-201ENSMUST00000178117 1065 ntBASIC18■□□□□ 0.47
Cfap54Q8C6S9 Gm15043-201ENSMUST00000118843 1543 ntBASIC18■□□□□ 0.47
Cfap54Q8C6S9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap54Q8C6S9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18■□□□□ 0.47
Cfap54Q8C6S9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap54Q8C6S9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap54Q8C6S9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap54Q8C6S9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cfap54Q8C6S9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap54Q8C6S9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap54Q8C6S9 Gm7889-201ENSMUST00000185591 958 ntBASIC17.98■□□□□ 0.47
Cfap54Q8C6S9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap54Q8C6S9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap54Q8C6S9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.98■□□□□ 0.47
Cfap54Q8C6S9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cfap54Q8C6S9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap54Q8C6S9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.98■□□□□ 0.47
Cfap54Q8C6S9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap54Q8C6S9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap54Q8C6S9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cfap54Q8C6S9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap54Q8C6S9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.96■□□□□ 0.47
Cfap54Q8C6S9 Gm11539-201ENSMUST00000119837 557 ntBASIC17.96■□□□□ 0.47
Cfap54Q8C6S9 Gm13436-201ENSMUST00000120418 567 ntBASIC17.96■□□□□ 0.47
Cfap54Q8C6S9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap54Q8C6S9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap54Q8C6S9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap54Q8C6S9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap54Q8C6S9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap54Q8C6S9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cfap54Q8C6S9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap54Q8C6S9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap54Q8C6S9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap54Q8C6S9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cfap54Q8C6S9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap54Q8C6S9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap54Q8C6S9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap54Q8C6S9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap54Q8C6S9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap54Q8C6S9 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.94■□□□□ 0.46
Cfap54Q8C6S9 Gm6345-202ENSMUST00000180900 204 ntBASIC17.94■□□□□ 0.46
Cfap54Q8C6S9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap54Q8C6S9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap54Q8C6S9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap54Q8C6S9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.94■□□□□ 0.46
Cfap54Q8C6S9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap54Q8C6S9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap54Q8C6S9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Cfap54Q8C6S9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap54Q8C6S9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms