Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a6Q8C6K9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a6Q8C6K9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Col6a6Q8C6K9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a6Q8C6K9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a6Q8C6K9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col6a6Q8C6K9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a6Q8C6K9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a6Q8C6K9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a6Q8C6K9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Col6a6Q8C6K9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a6Q8C6K9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a6Q8C6K9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a6Q8C6K9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a6Q8C6K9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.8■□□□□ 0.28
Col6a6Q8C6K9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a6Q8C6K9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a6Q8C6K9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a6Q8C6K9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Col6a6Q8C6K9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a6Q8C6K9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a6Q8C6K9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Col6a6Q8C6K9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a6Q8C6K9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a6Q8C6K9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a6Q8C6K9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a6Q8C6K9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Col6a6Q8C6K9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a6Q8C6K9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a6Q8C6K9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a6Q8C6K9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a6Q8C6K9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col6a6Q8C6K9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a6Q8C6K9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a6Q8C6K9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms